CV

Basics

Name Alice Rogier
Email alice.rogier@inria.fr
Phone +33619503598

Work

  • 2024.11 - NOW
    Postdoctoral Researcher
    Carpem Cancer Institute
    I am currently structuring and integrating chemotherapy data within the Carpem Master Observational Trial.
  • 2020.12 - 2024.10
    PhD student in Medical Informatics
    HeKA team - Inserm-Inria-Université Paris Cité
    Clinical data warehouses hold important information about chemotherapies and their effects, but it is often scattered and hard to interpret. To make use of these valuable data, I developed two knowledge graphs, OntoTox and ChemoOnto. These graphs organize data on chemotherapy treatments and toxicities, facilitating comparisons between theoretical treatment protocols and actual patient outcomes. I created the ProtoDrift metric to quantify deviations in chemotherapy protocols, thus refining adherence assessments. I validated ProtoDrift through survival analyses, showcasing its potential in advancing precision oncology research.
    • Knowledge graph
    • Survival analysis
    • Statistical learning
    • Text mining
  • 2019.11 - 2020.11
    Research engineer
    Inserm - Paris Georges Pompidou hospital
    I took part in the QualiHealth project aimed at improving the quality of healthcare data. I developed text mining tools to extract information from medical narrative reports during COVID crisis. I helped in the realisaton of OntoDol, an ontology on chronic pains.
    • Data quality
    • Text mining
    • Knowledge graph
    • API managment
  • 2019.03 - 2019.08
    Intern
    Inserm - Paris Georges Pompidou hospital
    High-Throughput Phenotyping on glomerular disease narrative reports.
    • Topic Model
    • Dynamic Time Wraping
  • 2018.07 - 2018.08
    Intern
    Parasitology Unit of the Center Dr. Hideyo - Merida, Mexico
    Identification of blood meals from Triatomia dimidiata in the Yucatán.
  • 2017.06 - 2018.08
    Intern
    EcoSys laboratory, INRA
    Characterization of metal contaminations in urban farm soils.

Education

  • Orsay, France

    Bachelor
    Université Paris-Saclay
    Organism Biology and Ecology
  • Orsay, France

    Master
    Université Paris Saclay
    Bioinformatics
  • Paris, France

    PhD
    Université Paris Cité
    Medical Informatics

Interests

Modern jazz dance
Hiking

References

Bastien Rance
Assistant Professor of Medical Informatics at Georges Pompidou hospital, researcher at HeKA team
Adrien Coulet
Assistant Professor specialized in knowledge graphs at University of Lorraine, researcher at HeKA team